13510_hs_NM_006312.0 CT--CAGAACAGGGCGGGGGGGGGGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCA-GGAGCAGGGCGGCTG-------------CCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCC----------------ATCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAAAGCCTTAACTAAGACTCCCGCCCCGGGCTGGCCCTGTGCAG--ACCTTAC--TCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAG---------GGGAAGG------GGCCG---------GGGAGGGGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCC-ACGCCACTGCCTC--CCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTCGCA---GCCCCCGCGCCCTCCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGG-ACG----CAGGCCCTGTCCAGCCCCCAG--TGC------GCTCGTTCCGGT---CCCCACAGACTGCCCCAGCCAACGAG----------------ATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCCAGG-----TGCGGCCTGGGGGGAACGGATGCTC---------CGAGGACTGGACTGTTTTTTTCACACATCGTTGCCGCAGCGGTGGGAAGGAAAGGCAGATGTAAATGATGTGTTGGTTTACAGGGTATATTTTTGATACCTTCAATGAATTAATTCAGATGTTTTACGCAAGGAAGGACTT-------ACCCAGTATTAC-TGCTGCTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGGGACTGCTGGCTCACGCCC-CGCTGTGTCCTCCCTCCCT---CCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTACACACGTCGTTCTAATTAAAAAGCGAATTATACTCC
13510_pt_NM_006312.0 CT--CAGAACGGGG--GAGGGGGGGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCGGCA-GGAGCGGGGCGGCTG-------------CCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCC----------------ATCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAAAGCCTTAACTAAGACTCCCGCCCCGGGCTGGCCCTGTGCAG--ACCTTAC--TCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAG---------GGGAAGG------GGCCG---------GGGAGGGGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCGGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCC-ACGCCACTGCCTC--CCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTCGCA---GCCCCCGCGCCCTCCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGG-ATG----CAGGCCCTGTCCAGCCCCCAG--TGC------GCTCGTTCCGGT---CCCCACAGACTGCCCCAGCCAACGAG----------------ATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCCAGG-----TGCGGCCTGGGGGGAACAGATGCTC---------CGAGGACTGGACTGTTTTTTTCACACATCGTTGCCGCAGCGGTGGGAAGGAAAGGCAGATGTAAATGATGTATTGGTTTACAGGGTATATTTTTGATACCTTCAATGAATTAATTCAGATGTTTTACGCAAGGAAGGACTT-------ACCCAGTATTAC-TGCTGCTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGGGACTGCTGGCTCACGCCC-CGCTGTGTCCTCCCTCCCT---CCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTACACACGTCGTTCTAATTAAAAAGCGAATTATACTCC
13510_mm_NM_006312.0 CC------ACGGAT--TGGGGGGGAGCGGTGCCAGGTCCCCGCACAAGGCAGAAGCAGCCCAGCATGGAGCAGA-CAGCTG-------------CTGACTCCCGAGACTGAGGAAGGAGCCCCTGAGTCTGCCTGCGCGTCCATCCGTCCGTCCGTCCACTCATCTGTCCATCCAGAGCTGGCATCCT-GCCTGTCTAAAGCCTTAACTAAGACTCCCACCCCGGGCTGGCCCTGCGCAGTGACCTTACACTCAGGGGATGTTTACCTGGTGCTCGAGAGGGGAGTGGACAGGAGGGGAGG------GACAGCGGGCCAGGAGGGGGGGGGACAGCAATCGTGTGTCAGTCGCACTCGTGCATCTGGGGCAGC-GGGGACCCACCACAGGCTGACCAGGCACCTCC-ATGCCACCGCCTCGCCCCTTACCGCATTTGGAACCAAAGTCTAAGCTGAACTCTCGCGTGGTCCTGC-CCCTCCCTCTGCC-CCCAGCCCGCTT-GCGCTCTGGACAGACAG-ACGTTCCCAG--CTTATCCTGCCCTAATGCTGT------CATCATCGCAGT---CTCCAAAGGCCACCC-AGCCCACAAG----------------ACTG--GGAGCCCA--TCAGACCAGGTGGGTGCACAAG-GGGCCAGG-----CCTGGCCTGGGG--CACGGATGCTTG--------CAGGAACTGGACCGTTT----CCCGGCCTGTTGCTGTGGCAACGGGAGGGAA-GGCACGTGTAAATG--GTGTTGGCTTACAGGGTATATTTTTGATACCTTCAATGAGTTAATTCAGACGTCTCACACAAGGAAGGACTC-------GCCC-GTGTTTC-TGCCGCTGTGCTTT-GGTCTCTACCTACTGTTTCAGAGGCACGTGCCAGCCAA--GGCGGTGGCCCCACCATACGCAGGACTTGGGGGTCAGGGGCT-CCGGCACACGGC---ACTGTGCCCTTCCCCCCCACCCCCTTCCTTGGGCAAAATGGACTTGATGCGTATTCTGTGGCCGCTCTCTGTGCA---CGGCGGCATTCTGTCATTTACACATGTTGTTCCAATTAGAAAGCAAAT-ATACTCA
13510_rn_NM_006312.0 CC------ACAGAT--TGGGGGGGAGCGGTGCCAGGTCCCTGCACGAGGCAGAAGCAGCCCAGCATGGAGCAGA-CAGCTG-------------CCAACTCCCCCGACTGAGGAAGGAGCCCCTGAATCTGCCTGCGCGTCCATCCGTCCGTCCGTCTACTCATCTGTCCATCCAGAGCTGGCATCCT-GCCTGTCTAAAGCCTTAACTAAGACTCCCGCCCCGGGCTGGCCCTGCGCAGTGACCTTACACTCAGGGGATGTTTACCTGGTGCTCGAGAGGGGAGTGGACAGGAGGGGAGGCCAGCGGGCCG---------GGAGAGGGGTACAGTGATCGTGTGTCAGTTGCACGCGTGCATCTGGGGCAGC-GGGGACCCAACACAGGATGACCAGGCACCTCC-ATGCCACTGCCTCGCCCCTTACCGCATTTGGAACCAAAGTCTAAGCTGAGCTCGC----GGCCCTGC-CCCTCCCTCTGCC-CCCAGCCCGCTC-GCGCTCTGGACAGACAG-ACGTTCCCAG--CTTATCCTGCCCC-AT--CGC------TGTCATCGCAGT---CCCCAAAGGCCACCC-AGCCCACAAG----------------ACTG--GGAGCCCA--TCAGACCAGGTGGGTGCACAAA-GGGCCGGG-----TATGGCCTGGGG--CACGGATGTTTG--------CAGGAACCGGACCGTTCATT-CCCGGCCTGTCGCTATGGCGATGGCGGGGAA-GGCAGGTGTAAATG--GTGTTGGCTTACAGGGTATATTTTTGATACCTTCAATGAGTTAATTCAGTCGCTTCACACAAGGAAGGACTC-------ACCC-GTGTTAC-TGCCGCTGTGCTTT-GGTCTCTGCTTCCTGTCCCAGAGGCATGTGCCGGCCAA--GGCGGTGGCCCCACCATACGCAGGACT-GGGGGGCAGGGGCT-CCGGCACACGGC---ACTGTGCCCTCCC--CCT---CCCTTCCTTGGGCAGAATGGACTTGATGCGTATTCTGTGGCCGCTCTCTGCA-----CGGCGGCATTCTGTCATTTACACATGTTGTTCCAATTAAAAGGCAAATTATACTCC
13510_cf_NM_006312.0 CTGTCAGAACGGGG--TGGGGGG---CGGCACCGGGACCCAGCGAGTGGCCAGAACAGCGGGGCAAGGAGTGGGGCAGCCG-------------CCGACTTCCCCCACTGAGGAAGGAGCCCCTGAGTCTGCCTGCGCGCCCGTCC--------------------GTCCGTCCAGAGCTGGCATCCTTGCCTGTCTAAAGCCTTAACTACGACTCCCGCCCCGGGCTGGTCCTGTGCAGTGACCTTAC--TCAGGGGATGTTTACCTGGTGCTCGGGAGGGGAG---------------G------GGCCA---------GGGAGGGGGCGCGGTGGT-GTGTGGTGGCCACACGCACGCAGCCGGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCCACGCCACTGCCTCCCCCCTTATCACATTTGGAACCAAAGTCTAAACTGAGCTAGCA---GCCCCCGCACCCTCCCT-TGTC-CCCATTCCGCTTCTCGCTCTGGACAGACGG-ACA----CGGGCCCTGTTCAGCCCCCCA--CGC------TCTTGTCCCGGG---CTCCATGGACTGCCCCAGTCAACGAG----------------ACTGCCGGAAACCCAGTTGGGCCGGATGGGTGGGCGAAAGGG----------TGCGGTCTGGGGCGAGCGGACGCTCC--------GAGGAACTGGACTATCTGTCTCGCACAGCGTCGCCGCAGCGGTGGGAAGGAAAGGCAGGTGTAAATGATGTATTGGTTTACAGGGTATATTTTTGATACCTTCAATGAATTAATTCAGATGTTTTACGCAAGGAAGGACTTT------ACCCAGTATTAT-TGCTGCTGTGCTTTCGATCTCTGCTTATCGTTCAAGAGACGTGTGCAGGCCACCAGGCAGTGAGCCCATCGGCCACAGGCCTGGGGGGGCGGGG-CT-GCGGCTCGTGAGCACCCTGCGCCCTCCCTCCTT---CCCTTCCTTGGGCAGAATAAACTTGATGGGTATTCTGTGACCGCCACCTGCGCACGGCGGTGGCGTTCTGTCATTTACACACATTGTTCTCATTAAAAAGCGAATTATACTCA
13510_gg_NM_006312.0 AG--CAGCCCGGGG--CAGGGAGA--TGGTGAC---------CAAACCGAAGGCGCGG--------GGAGCGAGGTGCCTGGGGCCCGGCCCCACTGGCTCTCATGAGCAAAGACGCAGGAGCAGAGCTTTCTTTTGGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCTCGGCAGATGGGACGG---TGGGAGCTGCCATCCCCGCCG--CGCAGGACGCGTCAGCTCGATGCGCTTTGCACGCAGCTG-GGGGAGCAGGGAGGGCGTGAAGAGCCATTTCTGAGAATATCGCTGGTCCCTTTGGT--GGCAGA-GGGCCTGGGCTCCGTCGGCGTGGG---AAGAGATTCCCCGTGCTGCCCACAGACGGGCTCGGTTGCT-TTAAGTGCATTGTTTTCTGAATGGTGAGAAAAGGCAATTGTAAATT--GTATTGGTCTACAGGGTATATTTTTGATACCTTCGGTGAATTATGTC-GATATTTTACGCAAGGAAGGACTTAAACAAAACACAGTATTACATGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13510_fr_NM_006312.0 TC--C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13510_dr_NM_006312.0 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                              10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990       1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      


PicTar score: 6.59 primates: 8.26 rodents: 3.34 dog: 8.16  chicken: 0.00 fishes: 0.00




Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex


hs
 6.59
 8.27
hsa-miR-30c
0.98 0.98
260 778
224 666
-24.6 -18.4
GCUGG____GUG______________GGGAUGUUUAC_:CGACU____CAC______________UCCUACAAAUG_ __UGA__GUGU_____GUUUACA_:__ACU__CACA_____CAAAUGU_ 

pt
 6.59
 8.26
hsa-miR-30c
0.98 0.98
260 778
222 664
-24.6 -16.3
GCUGG____GUG______________GGGAUGUUUAC_:CGACU____CAC______________UCCUACAAAUG_ __UGA___UGUA____GUUUACA_:__ACU___ACAU____CAAAUGU_ 

mm
 6.59
 3.33
hsa-miR-30c
0.96
260
237
-23.3
_CUG_G_AGUG_____________GGGAUGUUUAC_:_GAC_C_UCAC_____________UCCUACAAAUG_ 

rn
 6.59
 3.35
hsa-miR-30c
0.97
260
237
-23.3
_CUG_G_AGUG_____________GGGAUGUUUAC_:_GAC_C_UCAC_____________UCCUACAAAUG_ 

cf
 6.59
 8.16
hsa-miR-30c
0.98 0.98
260 778
220 652
-24.6 -18.0
_CUG_G_AGUG___________GGGAUGUUUAC_:_GAC_C_UCAC___________UCCUACAAAUG_ ______GGUGUA___GAUGU______UUACA_:______UCACAU___CUACA______AAUGU_