2955_hs_NM_002500.0 AGG--CACGCCAGTTTCACCATTTCC------------GGGAA--------ACGAACCCACTGTGCTTACAGTGACTGTCGTGTTTACAAAAGGCAGCCCTTTGGGTACTACTGCTGCAAA--GTGCAA--ATACT--CCAAGCTTCAAGTGATATATGTATTTATTGTCATTACTGCCTTTGGAAGA----------AACAGGGGATCAA--AG---TTCCTGTTCACCTTATGTATTATTTTCTATAGCTCTTCnnnnnnnnnn----nnnnnnnnnnnCAGTAA---AGTTTAAAAAA------TACACCACGAATTTGGTGTGGCTGTATTCAG-ATCGTATTAATTATCTGATCGGGATAACAAAA-TCACAAGCAATAATTAGGAT-CTATGCAATTTTTAAACTAGTAATGGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAACCAG---CATTTTACTACTTGTTACCTTTCCCATGCTGAATTATTTTGTTGTGATTTTGTACAGAATTTTTAATGACTTTTTATAATGTGGATTTCCTATTTTAAAACCATGCAGCTTCATCAATTTTTATACATATCAGAAAAGTAGAATTATATCTAATTTATACAAAA-TAATTTAACTAATTTA-----AACCAGCAGAAAAGTGCTTAGAAAGTTATTGTGTTGCCTTAGCACTTCTTTCCTCTCCAATTGTnnnnnnnnnnnnn------nnnnnnnnnnnnnnnnnnnnnTTGCACAATTTGAGCAATTCATTTCACTTTAAAGTC-------------TTTCC----GTCT-------------------CCCTAAAATAAAAACCAGAATCATAATTTTCAA----GAGAAGAAAAAATTA----AGAGATACATTCCCTATCA-------AAACATATCAATTCA---------------ACACATTACTTGCACAAGCTT-----------GTATATACAT---ATTATAAATAAATGCCAACATACCCTTCTTTAAATCAAAAGCTGCTTGACTATCACATACAATTTGCACTGTTACTTTTTAGTCTTTTA-CTCCTTTGCATTCCATGATTTT----------ACAGAGAATCTGAAGCTATTGATGTTTCCAGAAAATATAAATGCATGATTTTATACATAGTCACAAAAATGGTGGTTTGTCAT-ATATTCATGTAATAAATCTGAGCCTAAATCTAATCAGGTTGTTAATGTTGGGATTT-ATATCTATAGTAGTCAATTAGTACAGTAGCTT-AAATAAA-TTCAAACCATTTAATTCATAATTAGAACAATAGCTATTGCATGTAAAATGCAGTCCAGAATAAGTGCTGTTTGAGATGTGATGCTGGTACCACTGGAATCGA-TCTGTACTGTAATTTTGTTTGTAATCCTGTATATTATGGTGTAATGCACAAT------TTAGAAAACATTCATCCAGTTGCAATAAAA-TAGTATTGAAAGTG
2955_pt_NM_002500.0 AGG--CACGCCAGTTTCACCATTTCC------------GGGAA--------ACGAACC----GTGCTTACAGTGACTGTCGTGTTTACAAAAGGCAGCCCTTTGGGTACTACTGCTGCAAA--GTGCAA--ATACT--CCAAGCTTCAAGTGATATATGTATTTATTGTCATTACTGCCTTTGGAAGA----------AACAGGGGATCAA--AG---TTCCTGTTCACCTTATGTATTATTTTCTATAGCTCTTCTATTTAAAA-------AAAATAATACAGTAA---AGTTAAAAAAA------TACACCACGAATTTGGTGTAGCTGTATTCAG-ATCATATTAATTATCTGATCGGGATAACAAAA-TCACAAGCAATAATTAGGAT-CTATGCAATTTTTAAACTAGTAATGGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAACCAG---CATTTTACTACTTGTTACCTTTCCCATGCTGAATTATTTTGTTGTGATTTTGTACAGAATTTTTAATGACTTTTTATAATGTGGATTTCCTATTTTAAAACCATGCAGCTTCATCAATTTTTATACATATCAGAAAAGTAGAATTATATCTAATTTATACAAAA-TAATTTAACTAATTTA-----AACCAGCAGAAAAGTGCTTAGAAAGTTATTGTGTTGCCTTAGCACTTCTTTCCTCTCCAATTGT-----------------------AAAAAAAAAAAAAAAAATTGCACAATTTGAGCAATTCATTTCACTTTAAAGTC-------------TTTCC----CTCT-------------------CCCTAAAATAAAAACCAGAATCATAATTTTCAA----GAGAAGAAAAAATTA----AGAGATACATTCCCTATCA-------AAACATATCAATTCA---------------ACATATTACTTGCACAAGCTT-----------GTATATACAT---ATTATAAATAAATGCCAACATACCCTTCTTTAAATCAAAAGCTGCTTGACTATCACATACAATTTGCACTGTTACTTTTTAGTCTTTTA-CTCCTTTGCATTCCATGATTTT----------ACAGAGAATCTGAAGCTATTGATGTTTCCAGAAAATATAAATGCATGATTTTATACATAGTCACAAAAATGGTGGTTTGTCAT-ATATTCATGTAATAAATCTGAGCCTAAATCTAATCAGGTTGTTAATGTTGGGATTT-ATATCTATAGTAGTCAATTAGTACAGTAGCTT-AAATAAA-TTCAAACCATTTAATTCATAATTAGAACAATAGCTATTGCATGTAAAATGCAGTCCAGAATAAGTGCTGTTTGAGATGTGATGCTGGTACCACTGGAATCGA-TCTGTACTGTAATTTTGTTTGTAATCCTGTATATTATGGTGTAATGCACAAT------TTAGAAAACATTCATCCAGTTGCAATAAAA-TAGTATTGAAAGTG
2955_mm_NM_002500.0 AGG--CACGTCAGTTTCACTATTCCC------------GGGAA--------ACGAATC----GTGCGTACAGTGACTGTCCTGTTTACAGAAGGCAGCCCTTTTGCTAAGATTGCTGCAAA--GTGCAA--ATACT--CAAAGCTTCAAGTGATATATGTATTTATTGTCGTTACTGCCTTTGGAAGA----------AACAGGGGATCAA--AG---TTCCTGTTCACCTTATGTATTGTTTTCTATAGCTCTTCTATTTTAAAA------ATAATAATACAGTAA---AGTAAAAAAGAAAA-TGTGTACCACGAATTTCGTGTAGCTGTATTCAG-ATCGTATTAATTATCTGATCGGGATAAAAAAAATCACAAGCAATAATTAGGAT-CTATGCAATTTTTAAACTAGTAATGGGCCAATTAAAATATATATAAATATATATTTTTCAACCAG---CATTTTACTACCTGTGACCTTTCCCATGCTGAATTATTTTGTTGTGATTTTGTACAGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAAACCATGCAGCTTCATCAATTTTTATACATATCAGAAAAGTAGAATTATATCTAATTTATACAAAA-TAATTTAACTAATTTA-----AACCAGCAGAAAAGTGCTTAGAAAGTTATTGCGTTGCCTTAGCACTTCTTTCTTCTCTAATTGTAAAAAAGAAAAGA------AAA-GAAAAAAAACCAACAAATTGCACAATTTGAGCAATTCATCTCACTTTAAAGTT-------------TTTCCTGCTCGCT-------------------CCCTAAAATAGAAACCAGACCCATAACACTCAA----GAGGATGAAAACC-------GAAATGCATTCCTTATCA-------AAACACATCAATTCA--------------------TTACTTGCACAAGCTT-----------GTAAATACAT---ATTATAAATAAATGCCAACACACACTCCTTTAAATCAAAAGCTGCTTGACTATCACATACAATTTGCACTCTTTCTTTTTAGTCTTTTA-CTTCTTTGAATTCCATGATTTT----------ACGGAGTGTTTGAAGATATTGATGTTTCCAGAAAATATAAATGCATGATTTTATACATAGTCAAACAAATGGTGGTTTGTCAT-CTATTCATGTAATAAATCTGAGCCTAAATTTATTCAGGTTGTTAATGTTGGGTTTTTATACCTGT-GTAGTCAGTTAGTACAGTAGTTT-AAATAAAATTCAAACCATCGAATTCATAATTAGAACAATAGCTGTTGCATGTAAAATGCAGTCCAGAATAAGTGCTGTTTGAGATGTGATGCTGGTACTACTGGAATTGA-CATGTACTGTAATCTTGTTTGTAATCCTGTGTATTATGGTGTAATGCACAAT------TTAGAAAACTCCCATGCAGTTGCAATAAAAATAGTATGGAAAATC
2955_rn_NM_002500.0 AGG--CACGTCAGTTTCACCATTCCC------------GGGAA--------ACGAATC----GTGCTTACAGTGACTGTCCTGTTTACAGAAGGCAGCCCTTTTGATAACATTGCTGCAAA--GTGCAA--ATACT--CGAAGCTTCAAGGGATATATGTATTTATTGTCGTTACTGCCTTTGGAAGA----------AACAGGGGATCAA--AG---TTCCTGTTCACCTTATCTATTGTTTTCTATAGCTCTTCTATTTTAAAA----A-ATAATAGTACAGTAA---AGTAAAAAAGGAAAATGTGTACCACGAATTTCGTGTAGCTGTATTCAG-ATCGTATTAATTATCTGATCGGGATAAAAAAA-TCA--AGCAATAATTAGGAT-CTATGCAATTTTTAAACTAGTAATGGGCCAATTAAAGTATATATAAATATATATTTTTCAACCAG---CATTTTACTACTTGTTACCTTTCCCATGCCGAATTATTTTGTTGTGATTTTGTACAGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAAACCATGCAGCTTCATCAATTTTTATACATATCAGAAAAGTAGAATTATATCTAATTTATACAAAAATAATTTAACTAATTTA-----AACCAGCAGAAAAGTGCTTAGAAAGTTATTGCGTTGCCTTAGCACTTCTTTCTTCTCTAATTGTAAAAAAAAAAAAATAGAAAAGAAAAGAGAAAAACAACAAATTGCACAATTTGAGCAATTCATCTCACTTTAAAGTC-------------TTTCC----CTCT-------------------CCCTAAAGTAGAAACCAGACCCATAACACTCAA----GAGGAAAAAAA---------GAAATGCATTCCTTATCA-------AAACATATCGATTCA--------------------TTCCTTGCACACGCTT-----------GTAAATACAT---AATATAAATAAATGCCAACACACACTCCTTTAAATCAAAAGCTGCTCGACTATCACCCACAATTTGCACTCTTTCTTTTTAGTCTTTCA-CTTCTTTGAAGTCAATGATTTTT---------ATGGAGTGTCTGACGTTATTGATGTTTCGAGAAAATATAAATGCATGATTTTATACATAGTCAAACAAATGGTGGCTTGTCAT-CTATTCATGTAATAAATCTGAGCCTAAATTTATTCAGGTTGTTGATGTTGGGGTTT-ATACCTGT-GTAGTCAATTAGTACAGTAGTTT-AAATAAAATTCAAACCATCTGATCCATAATTAGAACAATAGCTATTGCATGTAAAATGCAGTCCAGAATAAGTGCTGTTTGCGATGTGATGCTGGTACTACTGGAATGGA-CATGTACTGTAATCTTGTTCGTAATCCTGTGTATTATGGTGTAATGCACAAT------TTAGAAAACTCTCATGCAGTTGCAATAAAAATAGTATTGAAAATC
2955_cf_NM_002500.0 GGGGGCGCGTCGGCTTCAGCATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACGTGCC----GTGCTCGCGGCGACCCTGGTGTTTACAAAAGGCAGCCCTTTGGGTACTATTGCTGCAAA--GTGCAA--ATACT--CCAAGCTCCGAGTGATAGATGTATTTATTGTCGTTACTGCCTTTGGGAGA----------AACAGGGGATCAA--AG---TTCCTGTTCACCTTATGTATTATTTTCTATAGCTCTTCnnnnnnnnnnnnnnn-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCACCACAAACTTGGTGCAGCTGTATTCAG-ATCATATGAATTATCTGATCGGGATAACAAAA-TCACAAGCAATAATTAGGAT-CTATGCAATTTTTGAACTAGTAATGGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAACCAG---CATTTTACTACTTGTTACCTTTCCCATGCTGAATTATTTTGTTGTGATTTTGTACAGAATTTTTAATGACTTTTTATAATGTGGATTTCCTATTTTAAAACCATGCAGCTTCATCAATTTTTATACATATCAGAAAAGTAGAATTATATCTAATTTATACAAAA-TAATTTAACTAATTTA-----AACCAGCAGAAAAGTGCTTAGAAAGTTATTGTGTTGCCTTAGCACTTCTTTCCTCTCTAATTGTAAAAAAA----------------AAAAAACAAACCCACAATTGCACAATTTGAGCAATTCATTTCACTTTAAAGTC-------------TTTCC----TTCT-------------------CCTTAAAATGAAAACCAGATCCATAACTCTTAA----GAGAATAAAAAAAAAGGAGAGAGATGTAGTCCCTATCA-------AAACATATCAATTCA---------------ATACATTACTTGCACAAGCTT-----------GTATATACAT---ATTATAAACAAATGCCAACATACCCTTCTTTAAATCAAAAGCTGCTTGACTATCACATACAATTTGCACTGTTTCTTTTTAGTCTTTTA-CTCCTTTGCATTCCATGATTTT----------ACAGAGAATCTGAAGCTATTGATGTTTCCAGAAAATATAAATGCATGATTTTATACATAGTCACACAAATGGTGGTTTGTCATTATATTCATGTAATAAATCTGAGCCTAAATCTAATCAGGTTGTTAATGTTGGGATTT-ATACCTATTGTAGTCAATTAGTACAGTAGCTT-AAATAAA-TTCAAACCATTTAATTCATAATTAGAACAATAGCTATTGCATGTAAAATGCAGTCCAGAATAAGTGCTGTTTGAGATGTGATACTGGTACCACTGGAATCGA-TCTGTACTGTAATCTTGTTTGTAATCCTGTATATTATGGTGTAATGCACAAT------TTAGAAAACACTCATCCAGTTGCAATAAAA-TAGTATTGAAAATC
2955_gg_NM_002500.0 --G--AGCGCCG------------CC------------GCCGA--------GCGGGGCCACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAATAATTCGGAT-CTATGCAATTTTTAACCTCGCGATGGGCC----------------------------TCAACCAA---CGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTACAGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAA-CCATGCAGCTTCATCAATTTTTATACATATCGGAAAGGTAGAATTATATCTAATTTATACGAAA-TAATTTAACTAATTTA-----AACCAGCAGAAAAGTGCTTAGAGAA--GTTCTGTTGCCTTAGCACTGCTTTCCTTTCAAATCGT------------------------------------------GCGCAATCCGGGCGATTTCTTTCCCATGAAAGTCGTTTTAGTTCCTTTTTCT----TTCTTTCTTCTTATTCCTTTCCCCCTTACGATCAGAACCAGACCCCCAGCTCTTGA----GAAGATAGAAGAACG----AGAGACTTATTTTCTATTA-------AAACATATCAGTTCA---------------ACACATGACTTGCACAAACTT-----------GTATATAAAT---ATTATAAGTAAATGCCAACAC---CCTTTTTAAATCGAAAGCTGCTTGACTATCACATACAATTTGCACTGTTTCTTTTTAGTCTCTGAGCCCCTTGGCATTCCGTGGTGTTTTATTTTCCTACAGAGAACTTGAAGCTCTCGGTGTTTCCGGACGCTGTAACTGCATGATTTTAGACATATTCACACGATCCGTGG-TTGTCAT-TTGCTCGTCTCATCACTCGGAACCTAAAGCTGAGCAGGTCGTTGGAGTCGGGCTGT-ATACCTATTGTAGTCGATTAGTACGGTAGCTTGAAACAAA-TTCAAACCATTTAATCCGTAATTAGAACAATAGCTATTGCATGTACAATGCAGTCCAGAATAAGTGCTGTTTGAAATGTAACTCTGGTTCAACTGGAATCAAATCTGTACTGTAATTTTGTTTGTAATCCTGTATATTATGGTGTAATGCACACTGGGATTTTAGGAAATGTCCATCCTTTTGCAACAACC-TAGTATTGAACATT
2955_fr_NM_002500.0 GGA--AGCGGCA--------AATAAC------------GGACA--------GTGAACC-------ATGACAAGGGGAAAAATGCTCATTGA-GGAAACGTTTTGTGTATTTCTTTTGT------TTTAT--ATGCTGTCTTTCTTTCCATCTTTCCATGTTTATGTCTGCATCA--GGCTGTAGAATACCTCTGTGCGGTCATGACATCAG--AGATGGTTGTGATGACATCACGCAGATGATGTAATAACTCTTT-------------------GTAGTGCTTTAT---CCTGCAGCAAA------TGATCCCTTAATATACTACTGCTGTTTATAGTATCATATGGA-------ATCAGC---------------AATAATCATTAAAAA-CTATGCAATTTTGTAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCTATCTATTTA------------------TTCCC----GATT-------------------TTTTTACATTAAATTTA---TTGTATTTTACCA----AAAAATAAAAACATT----AAAGACATAGTTTAAATTA-------CAACATATCTTTACATTGAAGGCTCAATAAAAACATAACGTGGACAACGTTCAAGTAGTGAAATGTCTACATTAAGTTGTATATTAATTATAACATTACTCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2955_dr_NM_002500.0 TGA-------------------TCCT----------------A--------ATG----GACTTTT---------ATCAGACTGCTCG-ACACGGTA----TTCTGTTATGGCTGATGCAAAAAGAGCAACAACATT--ATATGCTTAATCTTATGTACGTATTTATTGTTGTTACTGCCTTTAGGAGA----------AA-AGAGAATTGGTTGA---TTCTCGTTCACCTTATGTATTGTATTCTATAGCGCTTC-----------------------------------------------------------GGAATAGGCGTGACCTTGTTCAG-AATGTGTTAATTATC----CATGCTACAAAATCTCACAAGCAATAATTTGGAAACTATGCAATTTTTAATCCAATACTGGGCC----------------------------TCAACCTATTACATTTTACTACTTAT---CGATCCCATACTGAATTATTTTGTTGTGATTTTGTATAGAATTGTTAAT----TTTTATAAAGTCAGATCCCTGCGTCATT-CCATGCTACCCC-TCCATGTTAATG--TTTTATAAAACT-GATTTATCTCTCGTTTATATACGA-AACAGTACTCAATCTAGTAATAACCAGCAGGCAAGTGCTAAAAAATCTGTAATGTTGCCTTAGCAATGAATTACTGTAAAATCAT---------------------------------------------------------------------nGACACT-------------ATTTT----GTTT-------------------CTTTA----------------CGTTGTTTTCTATTATGTGTATAAAGGAGCA----ATGAACACATACTAAAACACAAAAATAAATACATTAATTTA---------------ATGCAATTCTTAATAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990       1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200      1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320      1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440      1450      1460      1470      1480      1490      


PicTar score: 4.00 primates: 4.46 rodents: 3.05 dog: 4.48  chicken: 5.49 fishes: 1.31


Org PicTar score PicTar score per species microRNA Probabilities Nuclei mapped to alignments Nuclei mapped to sequence Free Energies kcal/mol Structure of predicted duplex
hs 4.00 4.49 hsa-miR-190 0.89 0.89 587 918 525 793 -16.0 -19.2 _________AUCAA_______ACAUAUCA_:_________UAGUU_______UGUAUAGU_ _CCUA_____UC_AAACAUAUCA_:_GGAU_____AG_UUUGUAUAGU_
pt 4.00 4.43 hsa-miR-190 0.89 0.89 587 918 518 769 -16.0 -19.2 _________AUCAA_______ACAUAUCA_:_________UAGUU_______UGUAUAGU_ _CCUA_____UC_AAACAUAUCA_:_GGAU_____AG_UUUGUAUAGU_
mm 4.00 1.57 hsa-miR-190 0.79 587 525 -16.0 _________AUCAA_______ACAUAUCA_:_________UAGUU_______UGUAUAGU_
rn 4.00 4.53 hsa-miR-190 0.90 0.90 587 917 524 793 -16.0 -19.3 _________AUCAA_______ACAUAUCA_:_________UAGUU_______UGUAUAGU_ _CCU____UAUC_AAACAUAUC_:_GGA____AUAG_UUUGUAUAG_
cf 4.00 4.48 hsa-miR-190 0.89 0.89 587 918 555 817 -16.0 -19.8 _________AUCAA_______ACAUAUCA_:_________UAGUU_______UGUAUAGU_ _AU_UAGU___UAUC_AAACAUAUCA_:_UG_AUUA___AUAG_UUUGUAUAGU_
gg 4.00 5.49 hsa-miR-190 0.94 0.94 586 918 202 465 -14.8 -18.8 _________AUCAA_______ACAUAUC_:_________UAGUU_______UGUAUAG_ _ACUUA_____UAUUAA_ACAUAUCA_:_UGGAU_____AUAGUU_UGUAUAGU_
fr 4.00 2.63 hsa-miR-190 0.93 917 400 -14.3 _AC_UAGU____AUUA_AACAUAUC_:_UG_AUUA____UAGU_UUGUAUAG_