2096_hs_NM_005378.0 ACGCTTCTCAAAACTGGACAGTCA--CTGCCACTTTGCACATTTTGATTTTTTTTTTAAACAAACATTGTGTTGACATTAAGAATGTTGGTTTACTTTCAAATCGG--------TCCCCTGTCGAGTTCGGCTCTGGGTGGGCAGTAGGACCACCA--GTGTGGGGTTCTGCTGGGACCTTGG---------AGAGCCTGCA-TCCCAGGATGCTGGGTGGCCCT----GCAGCCTCCTCCACCTCACCTCCATGACAGCGCTAAACGTTGGTGACGGTTGGGAGCCTCTGGGGCTGTTGAAGTCACCTTGTG-TGTTCCAAGTTTCCAAACAACAG-AAAGTCATTCCTTCTTTTTAAAATGGTGCTTAAGTTCCAGCAGATGCCACATAA--GGGGTTTGCCATTTGAT-ACCCCTGGGGAACATTTCTGTAAATACCATTGACACATCCGCCTTTTGTATACATCCTGGGTAATGAGAGGTGGCTTTTGCGGCCAGT-ATTAGACTGGAAGTT--CATACCT---AAGTACTGTAATAATACCTCAATGTTTGAGGAGCATG------TTTTGTATACAAATATATTGTTAAT---------CTCTGTTATGTACTG--------TACTAATTCTTACACTGCCTGTATAC-TTTAGTATGACGCTGATACATAACTAAATTTGATACTTATATTTTCGTATGAAAATGAGTTGTGAAAGTTTTGAGTAGATATTACTTTATCAC------TTTTTGAACT------------AAGAAACTTTTGTAAAGAAA-------TTTACTAT-ATATATATG-------CCTTTTTCCTAGCCTGTT--TCTTCCT--GTTAATGTATTTGTTCATGTTTGGTGCATAGAACTGGGTAAA------TGCAAAGTTCTGTGTTTAA------TTTC----TTCAAAA--TGTATATATTTAGTGCTGCATCTTATAGCAC-TTTGAAATACCTCATGTTTATGAAAATAAATAGCTTAAAATT
2096_pt_NM_005378.0 AC------------TGGACAGTCA--CTGCCACTTTGCACATTTTGATTTTT-----AAACAAACATTGTGTTGACATTAAGAATGTTGGTTTACTTTCAAATCGG--------TCCCCTGTCGAGTTCGGCTCTGGGTGGGCAGTAGGACCACCAGTGTGTGGGGTTCTGCTGGGACCTTGG---------AGAGCCTGCA-TCCCAGGATGCTGGGTGGCCCT----GCAGCCTCCTCCACCTCACCTCCATGACAGCGCTAAACGTTGGTGACGGTTGGGAGCCTCTGGGGCTGTTGAAGTCACCTTGTG-TGTTCCAAGTTTCCAAACAACAG-AAAGTCATTCCTTCTTTTTAAAATGGTGCTTAAGTTCCAGCAGATGCCACATAA--GGGGTTTGCCATTTGAT-ACCCCTGGGGAACATTTCTGTAAATACCATTGACACATCCGCCTTTTGTATACATCCTGGGTAATGAGAGGTGGCTTTTGCGGCCAGT-ATTAGACTGGAAGTT--CATACCT---AAGTACTGTAATAATACCTCAATGTTTGAGGAGCATG------TTTTGTATACAAATATATTGTTAAT---------CTCTGTTATGTACTG--------TACTAATTCTTACACTGCCTGTATAC-TTTAGTATGACGCTGATACATAACTAAATTTGATACTTATATTTTCGTATGAAAATGAGTTGTGAAAGTTTTGAGTAGATATTACTTTATCAC------TTTTTGAACT------------AAGAAACTTTTGTAAAGAAA-------TTTACTAT-ATATATATG-------CCTTTTTCCTAGCCTGTT--TCTTCCT--GTTAATGTATTTGTTCATGTTTGGTGCATAGAACTGGGTAAA------TGCAAAGTTCTGTGTTTAA------TTTC----TTCAAAA--TGTATATATTTAGTGCTGCATCTTATAGCAC-TTTGAAATACCTCATGTTTATGAAAATAAATAGCTTAAAATT
2096_mm_NM_005378.0 AC------------CGGACAGTCA--CTGCCACTTTGCACATTTTGATTTTT-----AAACAAACATTGTGTTGACATTAAGAATGTTGGTTTACTTTCAAATTGG--------TCCCCTGTCGAGTCTGGATCTGGGTAGGGGGCAGGAC---------ACGGGGTTCTGCCATGACCTTGG------AAAAAAAACTGAC-TTATGGGATGCTGGGTGGCTTG----TTTTCCTCCTCCATATCACCT-GGTGACAGCCGTGGAAGTTCGGGACACTAAGGAGCTTCAGGAGGCTGTGAAGTCACCTTGTTCCGGTCCAAGATTCCAAAC------AGAGTCATTCCTTCTTTTTACAATGGTGCTTAAGTTCCAGCAAATGCCACAGAAGGGGGGGTTGCCATTTGAT-GCCCCT-GGGAACACTTGTGTAAATACCATTGATACACCCGCCTTTTGTATACGTCCTGGGTAATGAGAGGTGGCTCTTGCGGCCAGT-ATTAGACTGGAAGTT--CACACCT---AAGTACTGTAAGAATACCTCAATGTTTGAGGGGCATG------TTTTGTATACAAATATATTGTTAA-----------TCTGTTATGTACTG--------TACTAATTCCTACACGGCCTGTATAC-TTTAGTATGACGCTGATACATAACTAAATTTGATACTTATATTTTCGTATGAAAATGAGTTGTGGAAGTTTTGAGTAGATATTACTTTATCAC------TTTTTGAACT------------AAGAAACTTTTGTAAAGAAA------TTTTACTAT-ATATATATATTCC---TTTTTTTCCTAGCCTGTT--TCTTCCTTGTTTACTGTATTTGTTCATGTTTGGTGCATAGAACTGGGTAAA----ATGGCAAAGTTCTGTGTTTAA------TTTC----TTCAAAA--TGTATATATTTAGTGCTGCACCTTAGAGCAC-TTTGAAATACCTCATGTTTATGAAAATAAATAGC----AATT
2096_rn_NM_005378.0 AC------------CGGACAGTCA--CTGCCACTTTGCACATTTTGATTTTT-----AAACAAACATTGTGTTGACATTAAGAATGTTGGTTTACTTTCAAATCGG--------TCCCCTGTCGAGTTTGGATCTGGGTAGGGGGCAGGAC---------GCGGGGTTCTGCCATGACCTTGGAATAAAAAAAAAAACTGAGTTTATGGGATGCTGGGTGGCTTG----TTTTCCTCCTCCATATGACCT-GGTGACAGCCGTGGAAGTTCGGGACACTTAGGAGCTTCAGGAGGCTGTGAAGTCACCGTGTTCCGGTCCAAGTTTCCAAAC------AGAGTCATTCCTTCTTTTTACAATGGTGCTTAAGTTCCAGCAAATGCCACAGAA-GGGGGGTTGCCATTTGAT-GCCCCT-GGGAACGCTTGTGTAAATACCATTGATACACCCGCCTTTTGTATACGTCCTGGGTAATGAGAGGTGGCTCTCG-GGCCAGT-ATTAGACTGGAAGTT--CACACCT---AAGTACTGTAAGAATACCTCAATGTTTGAGGAGCATG------TTTTGTATACAAATACATTGTTAA-----------TCTGTTATGTACTG--------TACTAATTCCTACACGGCCTGTATAC-TTTAGTATGATGCTGATACATAACTAAATTTGATACTTATATTTTCGTATGAAAATGAGTTGTGGAAGTTTTGAGTAGATATTACTTTATCAC------TTTTTGAACT------------AAGAAACTTTTGTAAAGAAA------TTTTACTAT-ATATATATATTCCTTTTTTTTTTCCTAGCCTGTTTCTCTTCCTT-GTTACTGTATTTGTTCATGTTTGGTGCATAGAACTGGGTAAA---AATGGCAAAGTTCTGTGTTTAA-----TTTTC----TTCAAAATGTGTATATATTTAGTGCTGCACCTTAGAGCAC-TTTGAAATACCTCATGTTTATGAAAATAAATAGC----AATT
2096_cf_NM_005378.0 AC------------CGGACAGTCACTCTGCCACTTTGCACATTTTGATTTTT-----AAACAAACATTGTGTTGACATTAAGAATGTTGGTTTACTTTCAAATCGGTCCCCCCCTCCCCCGTCGAGTTTGGATCTGGGTGGGGAGCAGGAC--------------------------CTCCGG-------AGAGGGCCGGCC-TGATGGGATGCTGGGTGGCCCTTCGCGCTTTCCCCTCCGTGTCCCCTCCGAGACCGCGGTCGAAGTTCGTGACAGTCGGGAGCCTCTGG-GCTGTTGAAGTCACCTTGTT-GGTTCCAAGTTTCCAAACAACAGAAAAGTCATTC---CTTTTTAAAATGGTGCTTAAGTTCCAGCAGATGTCACAGAA--GGGGTTTGCCATTTGATAACCCCTGGGGAACATTTCTGTAAATACCATTGACACACCCGCCTTTTGTATACGTCCTGGGTAATGAGAGGTGGCTTTTGCGGCCAGT-ATTAGACTGGAAGTT--CATACCT---AAGTACTGT---AATACCTCAATGTTTGAGGAGCATG------TTTTGTATACAAATATATTGTTAAT---------CTCTGTTATGTACTG--------TACTAATTCTTACACTGCCTGTATAC-TTTAGTATGATGCTGATACATAACTAAATTTGATACTTATATTTTCGTATGAAAATGAGTTGTGAAAGTTTTGAGTAGATATTACTTTATCAC------TTTTTGAACT------------AAGAAACTTTTGTAAAGAAA-------TTTACTAT-ATATATATG-------CCTTTTTCCTAGCCTGTT--TCTTCCT--GTTAATGTATTTGTTCATGTTTGGTGCATAGAACTGGGTAAA------TGCAAAGTTCTGTGTTTAA------TTTC----TTCAAAA--TGTATATATTTAGTGCTGCATCTTATAGCAC-TTTGAAATACCTCATGTTTATGAAAATAAATAGC----AATT
2096_gg_NM_005378.0 AC------------AGGACAGTCA--TTGCCACTTTGCACATTTTTGTTCn----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTGAGCATTTGGAGCTGCTGATGACATCTAGTT-GAGTTGAAA---------------ACATCCATTCCTAATTTTT---ATGGTGCTTATGTTCTAACAGATGTTACTTTA--GGGGGTTGGCATTTG-T-ACCCCTCTGGGAATTTTCTGTAAATACCATCTACACACTTGCCTTTTGTACATGTCTTGGGTTATGAGAGGTGGCTTTTGCTGCCAGT-ATTAGACTGGAAGTT--CATACCT---AAGTACTGT---AATACCTCAATGTTTGAGGAGCATG-----TTTTTGTATACAAATATATTGTTAAT---------CTCTGTTATGTACTG--------TACTAATTCTTACATTGCCTGTATAC-TTTAGTATGATGCTGATACATAACTAAATTTGATACTTATATTTTCGTATGAAAATGAGTTGTGAAAGTTTTGAGTAGATATTACTTTATCAC-----TTTTTTGAACT------------AAGAAACTTTTGTAAAGAAA-------TTTACTAT-ATAT------------GCCTTTTCCTAGCCTGTT--TCTTCCA--GTTAATGTATTTGTTAATGTTTGGTGCATAGAACTGGGTAAC------TGCAAAGTTCTGTGTTTAA------TTTC----TTCCAAT--GGTGTACATTTAGTGCTGCGTCTTATAGCAC-TTTGAAATACCTCATGTTTATGAAAATAAATAGC----AATT
2096_fr_NM_005378.0 --------------CAGACAACCA--CTACCACCATGCAAATGCA------------AAAAAAGGATTAAGTTG---TTTGGAATCTTGGTTGATTTCAATGTTAA--------AACTGCCTCAATTGAAGTTATGGGTGGn----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTTATATATATAC------ATGTCAGGAAGCT------GCCAATAACTAGACTGGAAGTTTATATACCTTTAAAGTACTGT---AAAGCCTCGATTTTTGAGAGTTGTGAAACTTTGTAATATAACAATATATTGTTTTTTGTTTCCTGCTTTTTCTTATATTGTATCATCTTACTAATTC-TACAC-ACCTTTATGCTTTTAGTGTGAACCTGATACAT-ACTAAATTTGATACTTATATTTTCGTATGAAAATG---------AGTTCTTGGTAGATATCACTTTATCTCGACAATTTTTTCCCCTTCTATATCTCGAATAATTCTTTTGTACAGCAAAATGTGTTTTATCATCATGTACCTG-------GACTTCTTCTTTCC------TCCTCTT--TTGTTTATATTTGTAACAATCGGGTGCATAGAACTGGGTAAACAGATATGAGATGGGGTTTGTTTTGGGGGTTTTTCCACTTTTAAAA--TG--TACATTTAGTGCTGCAACTCATAGCACTTTTGAAATACCTCAT-TCTGAAAAAATAAATAG---------
2096_dr_NM_005378.0 CTGTGTCACAAG--CGAAAAGACT--TTCCAAGTCCCCACCCCCTGC--TTTTTTATAGACTGTTGCTGTGT--ATAGTTTGAACGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990       1000      1010      1020      


PicTar score: 7.13 primates: 7.03 rodents: 7.34 dog: 7.03  chicken: 8.28 fishes: 1.62






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 7.13
 6.98
hsa-let-7f
0.97 0.97
543 987
506 870
-19.7 -19.3
_ACUGUA_____UA_UACCUCA_:_UGAUAU_____AU_AUGGAGU_ ______GCA_UUUG___UACCUCA_:______UGU_AGAU___AUGGAGU_ 


pt
 7.13
 7.08
hsa-let-7f
0.97 0.97
543 987
491 855
-19.7 -19.3
_ACUGUA_____UA_UACCUCA_:_UGAUAU_____AU_AUGGAGU_ ______GCA_UUUG___UACCUCA_:______UGU_AGAU___AUGGAGU_ 


mm
 7.13
 7.30
hsa-let-7f
0.97 0.97
543 987
481 852
-19.4 -19.3
_ACUGUA________UACCUCA_:_UGAUAU________AUGGAGU_ ______GCA_UUUG___UACCUCA_:______UGU_AGAU___AUGGAGU_ 


rn
 7.13
 7.37
hsa-let-7f
0.97 0.97
543 987
486 865
-19.4 -19.3
_ACUGUA________UACCUCA_:_UGAUAU________AUGGAGU_ ______GCA_UUUG___UACCUCA_:______UGU_AGAU___AUGGAGU_ 


cf
 7.13
 7.03
hsa-let-7f
0.97 0.97
543 987
476 840
-18.8 -19.3
_ACUGUA________UACCUCA_:_UGAUAU________AUGGAGU_ ______GCA_UUUG___UACCUCA_:______UGU_AGAU___AUGGAGU_ 


gg
 7.13
 8.28
hsa-let-7f
0.98 0.98
543 987
271 632
-18.8 -19.3
_ACUGUA________UACCUCA_:_UGAUAU________AUGGAGU_ ______GCA_UUUG___UACCUCA_:______UGU_AGAU___AUGGAGU_ 


fr
 7.13
 3.23
hsa-let-7f
0.96
987
592
-18.3
_AACU____GCA__UUUG___UACCUCA_:_UUGA____UGU__AGAU___AUGGAGU_