PicTar WEB INTERFACE

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microRNA ID:
 Click above for all microRNAs linked to RFAM
Gene ID:
 Click above for all RefSeq Id's linked to NCBI
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vertebrates: use RefSeq identifiers, e.g. NM_003483 or Gene symbols (for example HK2).
Tissue:


PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 4.53 primates: 5.98 rodents: 3.73 dog: 3.88  chicken: 2.77 fishes: 1.88






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 4.53
 8.46
hsa-miR-190
0.99 0.99
556 582
439 459
-21.2 -19.4
_GCC__AU__GUC_AGCAUAUCA_:_UGG__UA__UAG_UUGUAUAGU_ _UCUAG_AUAUCA____________AACAUAUC_:_GGAUU_UAUAGU____________UUGUAUAG_ 


pt
 4.53
 3.49
hsa-miR-190
0.97
556
439
-21.2
_GCC__AU__GUC_AGCAUAUCA_:_UGG__UA__UAG_UUGUAUAGU_ 


mm
 4.53
 3.64
hsa-miR-190
0.97
556
379
-20.1
_ACCU_________GUC_AGCAUAUCA_:_UGGA_________UAG_UUGUAUAGU_ 


rn
 4.53
 3.82
hsa-miR-190
0.98
556
417
-21.1
_ACCU_____AU__GUC_AGCAUAUCA_:_UGGA_____UA__UAG_UUGUAUAGU_ 


cf
 4.53
 3.88
hsa-miR-190
0.98
556
386
-21.2
_GCC__AU__GUC_AGCAUAUCA_:_UGG__UA__UAG_UUGUAUAGU_ 


gg
 4.53
 2.77
hsa-miR-190
0.94
556
428
-20.9
_ACCU_AGUA_____GAGCAUAUCA_:_UGGA_UUAU_____UUUGUAUAGU_ 


dr
 4.53
 3.76
hsa-miR-190
0.98
556
182
-17.9
__UUAA___GUU__GCAUAUCA_:__GAUU___UAG__UGUAUAGU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.51 primates: 3.40 rodents: 3.54 dog: 3.60  chicken: 3.22 fishes: 1.94






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.51
 3.41
hsa-let-7f
0.97
528
419
-18.5
__CUGU___GUC___UACCUCA_:__GAUA___UAG___AUGGAGU_ 


pt
 3.51
 3.39
hsa-let-7f
0.97
528
419
-20.5
__CUGU___GUC_AUUACCUCA_:__GAUA___UAG_UGAUGGAGU_ 


mm
 3.51
 3.52
hsa-let-7f
0.97
528
359
-20.5
__CUGU___GUC_AUUACCUCA_:__GAUA___UAG_UGAUGGAGU_ 


rn
 3.51
 3.56
hsa-let-7f
0.97
528
397
-19.7
_AC_AUGC____GUC___UACCUCA_:_UG_UAUG____UAG___AUGGAGU_ 


cf
 3.51
 3.60
hsa-let-7f
0.97
528
366
-20.5
__CUGU___GUC_AUUACCUCA_:__GAUA___UAG_UGAUGGAGU_ 


gg
 3.51
 3.22
hsa-let-7f
0.96
528
410
-20.0
____GUA__GUC_AUUACCUCA_:____UAU__UAG_UGAUGGAGU_ 


dr
 3.51
 3.88
hsa-let-7f
0.98
528
154
-20.2
_AAC______GUC_AUUACCUCA_:_UUG______UAG_UGAUGGAGU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.51 primates: 3.40 rodents: 3.54 dog: 3.60  chicken: 3.22 fishes: 1.94






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.51
 3.41
hsa-let-7c
0.97
528
419
-25.1
_GAUCAU_AC_ACCUG_____UUACCUCA_:_UUGGUA_UG_UGGAU_____GAUGGAGU_ 


pt
 3.51
 3.39
hsa-let-7c
0.97
528
419
-25.5
_GAUCAU_AC_ACCU_____AUUACCUCA_:_UUGGUA_UG_UGGA_____UGAUGGAGU_ 


mm
 3.51
 3.52
hsa-let-7c
0.97
528
359
-24.0
_ACCA____GCCU_____AUUACCUCA_:_UGGU____UGGA_____UGAUGGAGU_ 


rn
 3.51
 3.56
hsa-let-7c
0.97
528
397
-25.6
_ACCAU___GCCUG_____UUACCUCA_:_UGGUA___UGGAU_____GAUGGAGU_ 


cf
 3.51
 3.60
hsa-let-7c
0.97
528
366
-23.7
_ACCA____ACCU_____AUUACCUCA_:_UGGU____UGGA_____UGAUGGAGU_ 


gg
 3.51
 3.22
hsa-let-7c
0.96
528
410
-24.6
_AACCA___A__U_AUUACCUCA_:_UUGGU___U__G_UGAUGGAGU_ 


dr
 3.51
 3.88
hsa-let-7c
0.98
528
154
-21.6
_AAUCA______AUA__U_AUUACCUCA_:_UUGGU______UGU__G_UGAUGGAGU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.51 primates: 3.40 rodents: 3.54 dog: 3.60  chicken: 3.22 fishes: 1.94






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.51
 3.41
hsa-let-7b
0.97
528
419
-27.0
_GAUCA_CAC_ACCUG_____UUACCUCA_:_UUGGU_GUG_UGGAU_____GAUGGAGU_ 


pt
 3.51
 3.39
hsa-let-7b
0.97
528
419
-27.4
_GAUCA_CAC_ACCU_____AUUACCUCA_:_UUGGU_GUG_UGGA_____UGAUGGAGU_ 


mm
 3.51
 3.52
hsa-let-7b
0.97
528
359
-28.3
_ACCACGC__G__U_AUUACCUCA_:_UGGUGUG__U__G_UGAUGGAGU_ 


rn
 3.51
 3.56
hsa-let-7b
0.97
528
397
-25.9
_ACCAU___GCCUG_____UUACCUCA_:_UGGUG___UGGAU_____GAUGGAGU_ 


cf
 3.51
 3.60
hsa-let-7b
0.97
528
366
-28.7
_ACCACAC__G__U_AUUACCUCA_:_UGGUGUG__U__G_UGAUGGAGU_ 


gg
 3.51
 3.22
hsa-let-7b
0.96
528
410
-23.5
_AACCA___A__U_AUUACCUCA_:_UUGGU___U__G_UGAUGGAGU_ 


dr
 3.51
 3.88
hsa-let-7b
0.98
528
154
-21.6
_AAUCA______AUA__U_AUUACCUCA_:_UUGGU______UGU__G_UGAUGGAGU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.51 primates: 3.40 rodents: 3.54 dog: 3.60  chicken: 3.22 fishes: 1.94






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.51
 3.41
hsa-let-7g
0.97
528
419
-19.2
_CUGUG_CG_____UUACCUCA_:_GACAU_GU_____GAUGGAGU_ 


pt
 3.51
 3.39
hsa-let-7g
0.97
528
419
-20.1
_CUGUG____C_AUUACCUCA_:_GACAU____G_UGAUGGAGU_ 


mm
 3.51
 3.52
hsa-let-7g
0.97
528
359
-20.1
_CUGUG____C_AUUACCUCA_:_GACAU____G_UGAUGGAGU_ 


rn
 3.51
 3.56
hsa-let-7g
0.97
528
397
-19.2
_CUGUG_CG_____UUACCUCA_:_GACAU_GU_____GAUGGAGU_ 


cf
 3.51
 3.60
hsa-let-7g
0.97
528
366
-20.1
_CUGUG____C_AUUACCUCA_:_GACAU____G_UGAUGGAGU_ 


gg
 3.51
 3.22
hsa-let-7g
0.96
528
410
-18.9
______UAA__U_AUUACCUCA_:______GUU__A_UGAUGGAGU_ 


dr
 3.51
 3.88
hsa-let-7g
0.98
528
154
-19.8
_____ACGAAU_____AUUACCUCA_:_____UGUUUG_____UGAUGGAGU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.51 primates: 3.40 rodents: 3.54 dog: 3.60  chicken: 3.22 fishes: 1.94






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.51
 3.41
hsa-let-7a
0.97
528
419
-21.0
_GAC______CA_ACCUG_____UUACCUCA_:_UUG______GU_UGGAU_____GAUGGAGU_ 


pt
 3.51
 3.39
hsa-let-7a
0.97
528
419
-21.4
_GAC______CA_ACCU_____AUUACCUCA_:_UUG______GU_UGGA_____UGAUGGAGU_ 


mm
 3.51
 3.52
hsa-let-7a
0.97
528
359
-21.2
_GAC_GU_CA____GCCU_____AUUACCUCA_:_UUG_UA_GU____UGGA_____UGAUGGAGU_ 


rn
 3.51
 3.56
hsa-let-7a
0.97
528
397
-21.1
_GAC_GU_AC___GCCUG_____UUACCUCA_:_UUG_UA_UG___UGGAU_____GAUGGAGU_ 


cf
 3.51
 3.60
hsa-let-7a
0.97
528
366
-21.3
_GAC____CA____ACCU_____AUUACCUCA_:_UUG____GU____UGGA_____UGAUGGAGU_ 


gg
 3.51
 3.22
hsa-let-7a
0.96
528
410
-22.7
_GAU___ACAACC_________AUUACCUCA_:_UUG___UGUUGG_________UGAUGGAGU_ 


dr
 3.51
 3.88
hsa-let-7a
0.98
528
154
-21.2
_AAC___AUA__U_AUUACCUCA_:_UUG___UGU__G_UGAUGGAGU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.51 primates: 3.40 rodents: 3.54 dog: 3.60  chicken: 3.22 fishes: 1.94






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.51
 3.41
hsa-miR-98
0.97
528
419
-20.2
_GACGAU____ACA_CU______UUACCUCA_:_UUGUUA____UGU_GA______GAUGGAGU_ 


pt
 3.51
 3.39
hsa-miR-98
0.97
528
419
-21.9
_GACGAU____ACA_CU_____AUUACCUCA_:_UUGUUA____UGU_GA_____UGAUGGAGU_ 


mm
 3.51
 3.52
hsa-miR-98
0.97
528
359
-21.5
_GACAGU____ACG_CU_____AUUACCUCA_:_UUGUUA____UGU_GA_____UGAUGGAGU_ 


rn
 3.51
 3.56
hsa-miR-98
0.97
528
397
-19.2
_GACAGU_CA_C_UGC_________UACCUCA_:_UUGUUA_GU_G_AUG_________AUGGAGU_ 


cf
 3.51
 3.60
hsa-miR-98
0.97
528
366
-21.9
_GACGAU____ACA_CU_____AUUACCUCA_:_UUGUUA____UGU_GA_____UGAUGGAGU_ 


gg
 3.51
 3.22
hsa-miR-98
0.96
528
410
-20.4
__CAGUA_A__U_AUUACCUCA_:__GUUAU_U__A_UGAUGGAGU_ 


dr
 3.51
 3.88
hsa-miR-98
0.98
528
154
-22.7
_AACGA_AUA__U_AUUACCUCA_:_UUGUU_UGU__A_UGAUGGAGU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.51 primates: 3.40 rodents: 3.54 dog: 3.60  chicken: 3.22 fishes: 1.94






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.51
 3.41
hsa-let-7i
0.97
528
419
-17.8
__CACA__CUG_____UUACCUCA_:__GUGU__GAU_____GAUGGAGU_ 


pt
 3.51
 3.39
hsa-let-7i
0.97
528
419
-19.9
__CACA___G__U_AUUACCUCA_:__GUGU___U__A_UGAUGGAGU_ 


mm
 3.51
 3.52
hsa-let-7i
0.97
528
359
-19.5
_GC_C_G__U_AUUACCUCA_:_CG_G_U__A_UGAUGGAGU_ 


rn
 3.51
 3.56
hsa-let-7i
0.97
528
397
-17.3
_AG_CAC_____CUG_____UUACCUCA_:_UC_GUG_____GAU_____GAUGGAGU_ 


cf
 3.51
 3.60
hsa-let-7i
0.97
528
366
-20.1
__CACA___G__U_AUUACCUCA_:__GUGU___U__A_UGAUGGAGU_ 


gg
 3.51
 3.22
hsa-let-7i
0.96
528
410
-19.3
_AGUA__A__U_AUUACCUCA_:_UCGU__U__A_UGAUGGAGU_ 


dr
 3.51
 3.88
hsa-let-7i
0.98
528
154
-20.1
_AG_ACGAAU_____AUUACCUCA_:_UC_UGUUUG_____UGAUGGAGU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.51 primates: 3.40 rodents: 3.54 dog: 3.60  chicken: 3.22 fishes: 1.94






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.51
 3.41
hsa-let-7e
0.97
528
419
-19.7
_____AC_ACCU_U_____UACCUCA_:_____UG_UGGA_G_____AUGGAGU_ 


pt
 3.51
 3.39
hsa-let-7e
0.97
528
419
-19.9
_____AC_ACCU______UUACCUCA_:_____UG_UGGA______GAUGGAGU_ 


mm
 3.51
 3.52
hsa-let-7e
0.97
528
359
-20.1
_____ACA___ACC___CCU________ACCUCA_:_____UGU___UGG___GGA________UGGAGU_ 


rn
 3.51
 3.56
hsa-let-7e
0.97
528
397
-20.1
_____ACA___ACC___CCU________ACCUCA_:_____UGU___UGG___GGA________UGGAGU_ 


cf
 3.51
 3.60
hsa-let-7e
0.97
528
366
-20.1
_____ACGAUC_CC_____________UACCUCA_:_____UGUUGG_GG_____________AUGGAGU_ 


gg
 3.51
 3.22
hsa-let-7e
0.96
528
410
-22.7
_____ACAACC_______UC_UUACCUCA_:_____UGUUGG_______AG_GAUGGAGU_ 


dr
 3.51
 3.88
hsa-let-7e
0.98
528
154
-19.6
_____ACAAUC____________UC_UUACCUCA_:_____UGUUGG____________AG_GAUGGAGU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.37 primates: 3.24 rodents: 3.40 dog: 3.48  chicken: 3.25 fishes: 0.00






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.37
 3.25
hsa-miR-135b
0.96
163
151
-18.7
_____AG_GAUG___________GAAAGCCAUA_:_____UC_UUAC___________UUUUCGGUAU_ 


pt
 3.37
 3.24
hsa-miR-135b
0.96
163
151
-18.7
_____AG_GAUG___________GAAAGCCAUA_:_____UC_UUAC___________UUUUCGGUAU_ 


mm
 3.37
 3.42
hsa-miR-135b
0.97
163
145
-19.4
_UACA____AGUGA______________GAAGCCAUA_:_GUGU____UUACU______________UUUCGGUAU_ 


rn
 3.37
 3.38
hsa-miR-135b
0.97
163
146
-22.4
___GUA_GAGUGA______________GAAGCCAUA_:___UAU_CUUACU______________UUUCGGUAU_ 


cf
 3.37
 3.48
hsa-miR-135b
0.97
163
148
-19.9
_UACA_AG_GAUG___________GGAAGCCAUA_:_GUGU_UC_UUAC___________UUUUCGGUAU_ 


gg
 3.37
 3.25
hsa-miR-135b
0.96
163
119
-19.9
_UACA_AG_GAUG___________GGAAGCCAUA_:_GUGU_UC_UUAC___________UUUUCGGUAU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.37 primates: 3.24 rodents: 3.40 dog: 3.48  chicken: 3.25 fishes: 0.00






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.37
 3.25
hsa-miR-135a
0.96
163
151
-19.1
_U__CAUG_____AGAAAGCCAUA_:_A__GUAU_____UUUUUCGGUAU_ 


pt
 3.37
 3.24
hsa-miR-135a
0.96
163
151
-19.1
_U__CAUG_____AGAAAGCCAUA_:_A__GUAU_____UUUUUCGGUAU_ 


mm
 3.37
 3.42
hsa-miR-135a
0.97
163
145
-19.2
_UACA_AG_GAU___________AGGAAGCCAUA_:_GUGU_UC_UUA___________UUUUUCGGUAU_ 


rn
 3.37
 3.38
hsa-miR-135a
0.97
163
146
-21.2
_UCACG_____AGGA______AGCCAUA_:_AGUGU_____UCCU______UCGGUAU_ 


cf
 3.37
 3.48
hsa-miR-135a
0.97
163
148
-19.6
_UACA_AG_GAUG___________GGAAGCCAUA_:_GUGU_UC_UUAU___________UUUUCGGUAU_ 


gg
 3.37
 3.25
hsa-miR-135a
0.96
163
119
-21.9
_UCACA_____AGGA______AGCCAUA_:_AGUGU_____UCCU______UCGGUAU_



PicTar predictions 
3832_hs_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCGTTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ACATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_pt_NM_000720.0 CCCCCAGCGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCAGGAGAGCCAGGGGA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTTGGGAGTAATATTCAATTAATTAGACTTTTGTATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCC-------------------CAAGCGGTTGAGCCTGGCAGA--------GTACCATGCGCTC-------GGCCCCAGCTGC----------------------AGGAAACAGCAGGCCCCGCCCTCTCA----CAGAGGAT------GGGTGAG----GAGGCCAGACCTGC----CCTGCCCCATTGTCCAGATGGGCACTGCTG----------TGGA-------GTCTGCTTCTCCCAT-GTACCAGGGCA-----CCAGGCCCACCCACCTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGACGATCATCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAG----TCACTGGGCCCA--ATATATCCATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTT----AGCTGTTCTGAAATA
3832_mm_NM_000720.0 --CCCAGTGA--GGGCAGGC-TGGCTC-----CAGCCAGAGAC-----GGGCACGGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGAAAAA--CGCTCAATTAGACTTTTGTACAAGTGATTTCATGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCTGGCATGTGCT----ATGTCACATGCTC-------AGGCCCGGCCTC----------------------AGAAGACAGTATATCTGGCCTGCACA-----------------------------GAGGCCAGA------------------------------GGGCTGCCC----------AGGA-------GTTGGTGTCTCCCAT----CCAGGGTGCATGCCCATGCCCCTTTGCCTGCAGACAT--------------GAGAGAGGTTAAAGGTGATGACAGTCACCACGCCTGTGTCATTACCTCAACCATT--------GGTCTAGCATATCAGACACCCACTGGGCCTG--GCATATCCATTTCTGAGCCCCCTCCCCC-AACACACTGGTTCCTGGTTTCTGTGG----AGCTGTTCTGA---A
3832_rn_NM_000720.0 --CCCAGCGA--GAGCAGGCTTGGCTC-----CAGCCTGGGAT-----GGGCACAGGAGGGCCAGGGAT-AAAGTGCCTCATAATTAGGAAAGTTTAGGCACTAGTTGGGAGGAAAA--TGCTCAATTAGACTTTTGTACGAGTGATTTCACGCCTCAAGGAAGCCATAAACCTGGTAGGAGCAGGTTC-------------------TGAGCG-----GCCAGGCATGTGCTACGCATGCCACATGCTC-------GGGCCCAGCCCC----------------------AGAAGACAGAATGTCTGGCCCCACCG-----AGAGGAT------GGGCGAGAGCAGCAGCCTGGCCTGC----ACAG-----------AGACCAGGACTGCCC----------AGGA-------GTCCATGTCTGCCAC----CCAGGGCTCATGCCCACGCCCCTTTGCCTGCAGACAC--------------GAGAGAGGTCAAAGGTGATGACAGTCACCATGCCTGTGTCGTTACCTCAACCATC--------GGTCTAGCATATCAGACGCTCGCTGGGCCCG--GCATATCCGTGTCTGAGCCCCCCTCCCCCAGAGCACTGGTTCCTGGTTTCTGTGC----AGCCGTTCTGA---G
3832_cf_NM_000720.0 CCCCCAGGGA-GGGGCAGAC-TGGCTC-----TGGCCTCAGGTG----GGGCGCCGGAGGGCCAGGAAA-AAAGTGCCTCATAGTTAGGAAAGTTTAGGCACTAGTGTGGAGTCCG---TATTCAATTAGACTTTTGTACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGTAGG-----------------------------GAACA-----GCCGTGCACC--------------CGTGCCC-------AGCCCCAGCTGT----------------------GGGAAGCAGCAGGTGCAGCCTTCCTG----GGGAGGACCCGAGAGGACGAG----GACGTGGGACAAGC----CCGGCCCACTCGTCCAGG---GCGCCCCCG-------------------------------------------GGGCACTCGCCCGCGCCCACCCACCTGCTGGCACGGT-----------GGGGAAGGTC-AAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATC--------GGTCTAGCATATCAGACATTCACTGGGCCCA--GCATATCCATTTTTAAACCCGTCCCCCCAAATACACTGCTTCCTGGTTTCTGTTT----AGCCGTTTTGAAATG
3832_gg_NM_000720.0 TATTTAGCAA-GGGAAAAGA-T--------------TTTAAAT-------------------AACAGAA-AAAGTGCCTCATAGTTTAAAGATGCTAGGCACTAGTTGGGGTTAAC---CGATCAAG-----TTTTGTACAAGTGATGTCACACCTCAAGGAAGCCATAA--CTAATA--AACAGATTATCTCCACGTTGCTGAAATGTGATCA-----GAGCTGCAGC--------ACATCATCTCTTCCCACAGAATCTTCAGTTTCTCTGTAGGAATAAGGTTATTTTGAAAAGAAGCAGGTTCTGACAATCAGTTTTTTGAGGGC------TAGAGTG----GGATTCTGAGGTGTAATATCTTGCCTGTTCTTCAACCTTGTGCTACTGTCCTTCATAGTAGA-------GCAGGATTTTG--------TCAGTGAAAATGTGTAAGTCCAGC------ACAACAC--------------GAGG-------TGAGTGATGACAACCAGTA-----ATGTCATTACCTCAGTACTC--------AA--GAGCATATCAGCTATCCATTG---------CATATCTATTCTAATACTGTTTTC------AAACCTGCCTCCTGATTTCTTTTCTTAATGCTCTTCTAAAACA
3832_fr_NM_000720.0 C-CCTCGCGCTACGGCGACC-TGGTTCGAAATCACCCTGCGACGGACTAAACGCAGACGGACAAGAGAACAAAGTGCCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3832_dr_NM_000720.0 CACCTGGTTT-GCTAAAAAC-TGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGGAGGACCGCCC----------GAACTTTCATTGGCTGCTTGTACCGTCACTCCAGGAAA------CGGACCAATGAGCAGCAAGCCGAGGTAACCGG-----GGGGCAGTTCCAAGGTGATGACAATCAGAACGAATATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATATCAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATATCCCTCCACAAAGGCTTTAGTTTCGG---CCCGTAT----GATTCGTTTTTAGTA
                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       


PicTar score: 3.18 primates: 3.12 rodents: 3.20 dog: 3.21  chicken: 3.70 fishes: 0.00






Org
PicTar score
PicTar score per species
microRNA
Probabilities
Nuclei mapped to alignments
Nuclei mapped to sequence
Free Energies kcal/mol
Structure of predicted duplex




hs
 3.18
 3.11
hsa-miR-189
0.96
96
84
-21.0
______GUUAG___AGU__AGGCAC_:______UAGUC___UCA__UCCGUG_ 


pt
 3.18
 3.12
hsa-miR-189
0.96
96
84
-21.0
______GUUAG___AGU__AGGCAC_:______UAGUC___UCA__UCCGUG_ 


mm
 3.18
 3.26
hsa-miR-189
0.96
96
80
-20.7
______AUUAG___AGU__AGGCAC_:______UAGUC___UCA__UCCGUG_ 


rn
 3.18
 3.13
hsa-miR-189
0.96
96
81
-20.7
______AUUAG___AGU__AGGCAC_:______UAGUC___UCA__UCCGUG_ 


cf
 3.18
 3.21
hsa-miR-189
0.96
96
84
-21.0
______GUUAG___AGU__AGGCAC_:______UAGUC___UCA__UCCGUG_ 


gg
 3.18
 3.70
hsa-miR-189
0.98
96
60
-19.9
________UAGUUU__AG____UAGGCAC_:________GUCGAG__UC____AUCCGUG_